Archives

2024  6

February  4

Python Exception Handling

February 24, 2024 · 8 min · Firas Sadiyah

Directing Python Output in Terminal

February 18, 2024 · 4 min · Firas Sadiyah

Running PyEnsembl on CentOS HPC

February 11, 2024 · 3 min · Firas Sadiyah

Debugging Python codebases using PyCharm and VSCode

February 4, 2024 · 5 min · Firas Sadiyah

January  2

Managing Python virtual environments

January 28, 2024 · 5 min · Firas Sadiyah

Running NetMHCPan on Apple Silicon

January 23, 2024 · 3 min · Firas Sadiyah

2022  1

October  1

Setting up a reproducible R environment on macOS

October 10, 2022 · 5 min · Firas Sadiyah

2021  3

May  1

Running NextFlow using AWS Batch

May 1, 2021 · 6 min · Firas Sadiyah

April  2

Using reticulate in RStudio with pyenv

April 28, 2021 · 4 min · Firas Sadiyah

Using data.table with OpenMP support

April 26, 2021 · 4 min · Firas Sadiyah

2018  2

October  1

Using RegEx to capture file name in Groovy/NextFlow

October 6, 2018 · 2 min · Firas Sadiyah

June  1

An overview of Illumina multiplexing

June 10, 2018 · 1 min · Firas Sadiyah

2017  6

December  1

Preparing genome reference in FASTA format

December 10, 2017 · 2 min · Firas Sadiyah

October  1

macOS setup for data science

October 8, 2017 · 3 min · Firas Sadiyah

September  1

Ubuntu setup for data science

September 16, 2017 · 7 min · Firas Sadiyah

August  2

Mounting remote drives locally using sshfs

August 29, 2017 · 1 min · Firas Sadiyah

Managing Python virtual environments

August 1, 2017 · 2 min · Firas Sadiyah

March  1

DaPars for alternative polyadenylation analysis

March 19, 2017 · 4 min · Firas Sadiyah